Pages tagged "Presentation"

2021

The GA4GH Beacon Protocol at BC2

A Standardized Format for Federated Genomic Data Exchange

Michael Baudis

BC2 Basel 2021

Session “Federating computational analyses with GA4GH standards”

BC2 logoDuring the “Federating computational analyses with GA4GH standards” workshop at BC2 2021 Michael presented history and the current status of the Beacon project, as well as its integration with specific data resources and analysis initiatives.

2021-09-13: more ...

A cancer genomics reference resource and implementation toolkit around GA4GH standards

Q. Huang, B. Gao, R. Paloots, P. Carrio-Cordo, Z. Yang, M. Baudis

ESHG 2021

ESHG LogoThis poster presentation at the European Society of Human Genetics meeting 2021 discusses the integration and development of GA4GH standards by the Progenetix oncogenomics resource.

2021-08-31: more ...

hCNV Community and Implementation Studies

Michael Baudis

ELIXIR All Hands 2021 Human Data Day

At the Human Data Day Michael presents a very brief overview of the ending and upcoming ELIXIR hCNV implementation studies.

2021-06-11: more ...

hCNV data and the Progenetix Beacon

Michael Baudis

ELIXIR All Hands 2021

This presentation gives a brief overview of the use of the Progenetix resource to test and implement a genomics reference resource using the emerging Beacon v2 protocol.

2021-06-08: more ...

ELIXIR Beacon Project

Concepts | Status | History | Outlook

Michael Baudis

Research Data Alliance - RDA Virtual Plenary 17

This seminar gives an overview of current state of the Progenetix Beacon project and the overall connection to the Global Alliance for Genomics and Health (GA4GH).

2021-04-20: more ...

GA4GH Connect - Beacon v2 and SchemaBlocks

GA4GH Connect 2020

Michael Baudis

Beacon v2 Structural Variants [slides]
SchemaBlocks {S}[B] [slides]

2021-03-02: more ...

2020

GA4GH Beacon v2 - Evolving Reference Standard for Genomic Data Exchange

GA4GH 8th Plenary

Gary Saunders, Jordi Rambla de Argila, Anthony Brookes, Juha Törnroos and Michael Baudis

For the ELIXIR Beacon project, GA4GH Discovery work stream and the international network of Beacon API developers

2020-09-30: more ...

ELIXIR Open Day - Wellcome Trust Genome Campus Hinxton

ELIXIR Beacon Project - Networking Resources Across and Beyond ELIXIR Human Data Communities

Michael Baudis

2020-02-06: more ...

2019

Mini-Symposium about CNV and Data Standards at AMED Japan, Tokyo

Cancer Genomics and Implementation of Data Driven Standards for Genomic Data Exchange

Michael Baudis

2019-10-08: more ...

2018

Abstract: ECCB 2018

ELIXIR Beacon - A Driver Project for the Global Alliance for Genomics and Health

Michael Baudis for the ELIXIR Beacon Project

2018-09-08: more ...

ELIXIR All Hands, Berlin

The ELIXIR Beacon in 2018: A driver project of GA4GH

Michael Baudis

2018-06-06: more ...

Abstract: ELIXIR All Hands 2018

Genomic profiles of cancer cell lines - A systematic review

Rahel Paloots, Qingyao Huang, Paula Carrio Cordo and Michael Baudis

2018-06-04: more ...

Abstract: ELIXIR All Hands 2018

Update on arrayMap Cancer Genome Resource

Qingyao Huang and Michael Baudis

2018-06-04: more ...

Abstract: ELIXIR All Hands 2018

Biocuration for cancer genome databases: arrayMap and Progenetix

Paula Carrio Cordo and Michael Baudis

2018-06-04: more ...

Abstract: ELIXIR All Hands 2018

ELIXIR Beacon - A Driver Project for the Global Alliance for Genomics and Health

Michael Baudis for the ELIXIR Beacon Project

2018-06-04: more ...

Abstract: ELIXIR All Hands 2018

segment_liftover : a Python tool to convert segments between genome assemblies

Bo Gao, Qingyao Huang and Michael Baudis

2018-06-04: more ...

DPPH - Data Protection in Personalized Health 2018, Lausanne

Genome Beacons for Data Discovery - Technical advances in a challenging environment

Michael Baudis

2018-02-15: more ...

2017

[BC]2 2017 - Basel Computational Biology Conference

Advancing the Global Alliance for Genomics and Health data schemas through data-driven implementations

Michael Baudis

2017-09-13: more ...

Seminar at SDU Odense

Somatic CNV databases as resources for cancer research && GA4GH schema development

Michael Baudis

2017-08-29: more ...

Brupbacher Meeting

Implementing Data Models for the Global Alliance for Genomics and Health

Bo Gao

2017-02-01: more ...

2016

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