The shows a probably incomplete following list of presentations (posters, talks, abstracts) from group members. Usually, PDF versions of the slides or posters are linked from the details pages.

2020

SchemaBlocks and GA4GH TASC

2020-04-20: more ...

SWISSNEX SF Lunch Seminar - Data Mining in Genomics

Genomic Research and Personalised Health Strategies

Resources | Standards | Protocols | Tools | Discourse

2020-03-19: more ...

BBOP Presentation - Baudisgroup Projects & Interests

2020-02-14: more ...

ELIXIR Open Day - Wellcome Trust Genome Campus Hinxton

ELIXIR Beacon Project - Networking Resources Across and Beyond ELIXIR Human Data Communities

Michael Baudis

2020-02-06: more ...

GA4GH SchemaBlocks for Human Cell Atlas

2020-01-28: more ...

2019

3rd St. Gallen Radiation Oncology Informatics Meeting

Bioinformatics and data exchange for genomics in an international context

Michael Baudis

2019-11-08: more ...

Mini-Symposium about CNV and Data Standards at AMED Japan, Tokyo

Cancer Genomics and Implementation of Data Driven Standards for Genomic Data Exchange

Michael Baudis

2019-10-08: more ...

BC2 2019, Basel

Minimum Error Calibration and Normalization for Genomic Copy Number Analysis

Bo Gao

2019-09-10: more ...

BC2 2019, Basel

Minimum Error Calibration and Normalization for Genomic Copy Number Analysis

Bo Gao

2019-09-10: more ...

Seminar Universita degli Studi Firenze - Dipartimento di Biologia

Structural Genome Variants in Cancer: Research, resources standards

Michael Baudis

2019-09-03: more ...

ELIXIR All Hands - Lisbon 2019

Introduction to Beacon

Michael Baudis

2019-06-17: more ...

Human Genome Variation Society - Gothenburg 2019

Implementation Driven Development of Standards for Genomic Data Exchange from Cancer Genome Data Collections

Michael Baudis

2019-06-14: more ...

R&D Data Intelligence Leaders Forum Basel

Connecting the silos - Genomic Data Standards, Resources and the Global Alliance for Genomics and Health

Michael Baudis

2019-01-25: more ...

2018

UZH BIO390 “Introduction to Bioinformatics”

Bioinformatics - Introduction

Michael Baudis

2018-09-17: more ...

Abstract: ECCB 2018

ELIXIR Beacon - A Driver Project for the Global Alliance for Genomics and Health

Michael Baudis for the ELIXIR Beacon Project

2018-09-08: more ...

IMLS Progress Report

Towards understanding population effect on cancer

Qingyao Huang

Qingyao 2018-06-29: more ...

ELIXIR All Hands, Berlin

The ELIXIR Beacon in 2018: A driver project of GA4GH

Michael Baudis

2018-06-06: more ...

Abstract: ELIXIR All Hands 2018

Genomic profiles of cancer cell lines - A systematic review

Rahel Paloots, Qingyao Huang, Paula Carrio Cordo and Michael Baudis

2018-06-04: more ...

Abstract: ELIXIR All Hands 2018

Update on arrayMap Cancer Genome Resource

Qingyao Huang and Michael Baudis

2018-06-04: more ...

Abstract: ELIXIR All Hands 2018

Biocuration for cancer genome databases: arrayMap and Progenetix

Paula Carrio Cordo and Michael Baudis

2018-06-04: more ...

Abstract: ELIXIR All Hands 2018

segment_liftover : a Python tool to convert segments between genome assemblies

Bo Gao, Qingyao Huang and Michael Baudis

2018-06-04: more ...

Abstract: ELIXIR All Hands 2018

ELIXIR Beacon - A Driver Project for the Global Alliance for Genomics and Health

Michael Baudis for the ELIXIR Beacon Project

2018-06-04: more ...

DPPH - Data Protection in Personalized Health 2018, Lausanne

Genome Beacons for Data Discovery - Technical advances in a challenging environment

Michael Baudis

2018-02-15: more ...

2017

Special seminar at University of Timisoara Dermatology

Cancer Genome (Data) Analysis in Personalised Medicine

Michael Baudis

2017-12-07: more ...

UZH Cancer Biology course “Research with clinical samples

Personalised Medicine - Genome Variation / Data Formats / Resources / Sharing / Privacy

Michael Baudis

2017-12-01: more ...

GA4GH 2017 Plenary / Workstream Day

Developing Beacons for Data Discovery

Michael Baudis

2017-10-15: more ...

UZH BIO390 “Introduction to Bioinformatics”

Bioinformatics - Introduction

Michael Baudis

2017-09-19: more ...

[BC]2 2017 - Basel Computational Biology Conference

Advancing the Global Alliance for Genomics and Health data schemas through data-driven implementations

Michael Baudis

2017-09-13: more ...

Seminar at SDU Odense

Somatic CNV databases as resources for cancer research && GA4GH schema development

Michael Baudis

2017-08-29: more ...

Seminar at SDU Odense

Somatic CNV databases as resources for cancer research && GA4GH schema development

Michael Baudis

2017-08-29: more ...

ELIXIR All Hands, Rome

GA4GH Metadata & Beyond

Michael Baudis

2017-03-22: more ...

Seminar - Stanford Center for Genomics & Personalized Medicine

Personalized medicine in cancer

Michael Baudis

2017-02-21: more ...

Brupbacher Meeting

Implementing Data Models for the Global Alliance for Genomics and Health

Bo Gao

2017-02-01: more ...

R&D Data Intelligence Leaders Forum Basel

Genome data access - Application to personalized health and cancer research

Michael Baudis

2017-01-26: more ...

2016

Antrittsvorlesung Universität Zürich - Inaugural Lecture at University of Zurich

Cancer Genome (Data) Analysis

Michael Baudis

2016-12-19: more ...

LSZGS Cancer Biology course 2016

Personalized medicine in cancer

Michael Baudis

2016-12-02: more ...

Biocuration 2016, Geneva

Harvesting Cancer Genome Data

Michael Baudis

2016-04-14: more ...

VIB Conference “Applied Bioinformatics in Life Sciences”

Gene-based analysis of focal copy number aberration patterns in cancer genomes

Saumya Gupta

2016-03-17: more ...

2001

First BCATS Meeting - Biocomputing @ Stanford 2001

progenetix.net: storage and visualization of genomic aberration data in human malignancies

Michael Baudis

2001-10-20: more ...

Archive …

  • 2017-11-05: Qingyao Huang. EMBL Cancer Genomics poster: integrative analysis of cancer genome profiling data to study the interplay of genetic background and molecular mechanisms in cancer [pdf]
  • 2017-09-11: Michael Baudis, SIB-Novartis Workshop: Group projects “Biocuration to Cancer Genomics: Resources, Standards, Data Science” pdf
  • 2017-03-21: Bo Gao, ELIXIR All Hands, Rome: Implementing Data Models for the Global Alliance for Genomics and Health (poster)
  • 2017-03-02: Michael Baudis, SPHN Basel-Zürich cluster workshop: Project proposal slides “Knowledge infrastructure for cancer related personalized health applications”
  • 2017-02-01: Paula Carrio Cordo, Brupbacher Meeting: arrayMap & Progenetix 2017: Oncogenomic Databases Towards Personalized Medicine pdf
    • Poster about the ongoing development of our arrayMap and Progenetix resources, with emphasis on the identification of geographic and cancer type related biases in global oncogenomic data production
  • 2002-10-25: Michael Baudis, “BCATS - BioComputing AT Stanford 2002”: Collection and Transformation of Chromosomal Imbalances in Human Neoplasias for Data Mining Procedures
    • From the second BCATS meeting, an update on the Progenetix data repository and analysis tools