Howto

Array Re-shuffling in Perl

This dependency-free array randomiser will return a re-shuffled array or a slice of random $iL array elements.

mbaudis 2018-07-20: more ...

Directories and File Structure

The Progenetix Jekyll template modifies the standard Jekyll file structure.

@mbaudis 2019-03-14: more ...

Format of the YAML Header

The YAML headers are necessary to process the Markdown (or HTML) files in the page collections. The Progenetix Jekyll template uses standard Jekyll headers, but also adds some additional parameters.

@mbaudis 2019-03-14: more ...

Genome editions and liftover

Since the first release in 2000, the human reference genome is continuously being worked on. While the most recent major release (GRCh38) dates back to 2013, minor releases (GRCh38.pX) are issued more frequently and can be downloaded from the official NCBI Genome Reference Consortium website.

Michael 2018-07-20: more ...

Local Jekyll based website generation

In an ideal scenario, your Github served website could be build locally, with the same output structure and layout.

@mbaudis 2019-03-14: more ...

MongoDB Cheat Sheet

2018-04-10: more ...

Setting up a standard installation of MongoDB on OS X

2018-04-18: more ...

Simple Map Plotting Utility

This utility allows the plotting of Google maps with included proportional markers, based on a file accessible through an URL (e.g. a Dropbox share link).

mbaudis 2018-07-20: more ...

Some Regular Expressions and more…

This page contains some regular expressions which have come in handy during our work. Code is in Perl style syntax.

Michael 2018-07-20: more ...